Spinal Cord Toolbox
3
Contents:
Introduction
Installation
Getting Started
SCT Concepts
Support
Command-Line Tools
Python API
Development Notes
Spinal Cord Toolbox
Docs
»
Index
Index
A
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C
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D
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G
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M
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N
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P
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Q
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R
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S
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T
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U
A
add_entry() (in module spinalcordtoolbox.reports.qc)
add_slice() (spinalcordtoolbox.reports.slice.Slice static method)
Axial (class in spinalcordtoolbox.reports.slice)
C
centerline2roi() (in module spinalcordtoolbox.centerline.optic)
check_backend() (in module spinalcordtoolbox.deepseg_gm.deepseg_gm)
Coronal (class in spinalcordtoolbox.reports.slice)
crop() (spinalcordtoolbox.reports.slice.Slice static method)
crop_center() (in module spinalcordtoolbox.deepseg_gm.deepseg_gm)
CroppedRegion (class in spinalcordtoolbox.deepseg_gm.deepseg_gm)
D
DataResource (class in spinalcordtoolbox.deepseg_gm.deepseg_gm)
detect_centerline() (in module spinalcordtoolbox.centerline.optic)
dice_coef() (in module spinalcordtoolbox.deepseg_gm.model)
dice_coef_loss() (in module spinalcordtoolbox.deepseg_gm.model)
G
get_dim() (spinalcordtoolbox.reports.slice.Slice method)
get_file_path() (spinalcordtoolbox.deepseg_gm.deepseg_gm.DataResource method)
get_name() (spinalcordtoolbox.reports.slice.Slice method)
get_slice() (spinalcordtoolbox.reports.slice.Slice method)
M
make_content_path() (spinalcordtoolbox.reports.qc.QcReport method)
mosaic() (spinalcordtoolbox.reports.slice.Slice method)
N
nan_fill() (spinalcordtoolbox.reports.slice.Slice static method)
P
pad() (spinalcordtoolbox.deepseg_gm.deepseg_gm.CroppedRegion method)
Params (class in spinalcordtoolbox.reports.qc)
Q
QcImage (class in spinalcordtoolbox.reports.qc)
QcReport (class in spinalcordtoolbox.reports.qc)
R
resample_file() (in module spinalcordtoolbox.resample.nipy_resample)
resample_image() (in module spinalcordtoolbox.resample.nipy_resample)
S
Sagittal (class in spinalcordtoolbox.reports.slice)
segment_file() (in module spinalcordtoolbox.deepseg_gm.deepseg_gm)
segment_volume() (in module spinalcordtoolbox.deepseg_gm.deepseg_gm)
single() (spinalcordtoolbox.reports.slice.Slice method)
Slice (class in spinalcordtoolbox.reports.slice)
spinalcordtoolbox.centerline.optic (module)
spinalcordtoolbox.deepseg_gm.deepseg_gm (module)
spinalcordtoolbox.deepseg_gm.model (module)
spinalcordtoolbox.deepseg_sc.cnn_models (module)
spinalcordtoolbox.reports.qc (module)
spinalcordtoolbox.reports.slice (module)
spinalcordtoolbox.resample.nipy_resample (module)
T
template() (spinalcordtoolbox.reports.qc.QcImage method)
threshold_predictions() (in module spinalcordtoolbox.deepseg_gm.deepseg_gm)
U
update_description_file() (spinalcordtoolbox.reports.qc.QcReport method)